Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL21119.1Putative ABC transporter, ATP-binding protein. (264 aa)    
Predicted Functional Partners:
EFL24456.1
Putative ABC transport system integral membrane protein.
 
 0.991
EFL23680.1
ABC lipoprotein transporter, permease component.
 
 0.936
EFL28396.1
Putative ABC transporter integral membrane protein.
 
 0.930
EFL25523.1
Putative ABC transporter integral membrane protein.
 
 
 0.842
EFL21628.1
Putative ABC transporter integral membrane protein.
 
 0.826
EFL21566.1
Efflux ABC transporter, permease.
 
 0.774
EFL21565.1
Efflux ABC transporter, permease.
  
 0.734
EFL22542.1
Putative ABC transport system integral membrane protein.
 
 
 0.726
EFL22750.1
ABC transporter, ATP-binding protein.
  
  
  0.664
EFL24130.1
Putative membrane protein.
   
 
 0.647
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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