STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21131.1Putative GntR-family transcriptional regulator. (251 aa)    
Predicted Functional Partners:
EFL21132.1
Glucose 1-dehydrogenase.
       0.799
EFL27935.1
GntR family transcriptional regulator.
  
     0.771
EFL21133.1
Tat (twin-arginine translocation) pathway signal sequence domain-containing protein.
       0.707
EFL28013.1
Transcriptional regulator, GntR family/UbiC transcription regulator.
  
     0.682
EFL24103.1
Putative transcriptional regulator, GntR family.
  
     0.671
EFL29383.1
Putative GntR-family transcriptional regulatory protein.
  
     0.553
EFL25168.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.514
EFL27183.1
GntR family transcriptional regulator; Truncated CDS.
  
    0.509
EFL27304.1
Putative GntR-family transcriptional regulator; Unextendable partial coding region.
  
     0.494
EFL21964.1
Putative helix-turn-helix domain protein.
  
    0.488
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.