STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21141.1Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (200 aa)    
Predicted Functional Partners:
EFL24240.1
Sulfate transporter.
 
 0.978
EFL21140.1
Sulfate transporter.
 
 0.946
EFL26853.1
Carbonate dehydratase.
    
 0.941
EFL24944.1
Carbonate dehydratase.
 
 
0.929
EFL21162.1
Putative bacterial transferase hexapeptide repeat protein.
    
 0.902
EFL28462.1
Putative non-ribosomal peptide synthetase; Truncated CDS; unextendable partial coding region.
  
 0.819
EFL27796.1
Putative sulfate transporter family protein.
 
 
 0.773
EFL22581.1
Putative ATPase, AFG1 family protein.
     
 0.605
EFL27260.1
SPFH/Band 7 domain protein; Truncated CDS; unextendable partial coding region.
       0.605
EFL21142.1
Two-component system response regulator TcsR4.
       0.557
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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