STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21159.1YbaK/prolyl-tRNA synthetase associated region. (184 aa)    
Predicted Functional Partners:
EFL21160.1
cro/CI family transcriptional regulator.
       0.840
EFL21161.1
Putative integral membrane protein; Unextendable partial coding region.
       0.759
EFL27133.1
Putative transcriptional regulator.
  
   
 0.757
EFL21162.1
Putative bacterial transferase hexapeptide repeat protein.
       0.728
EFL20707.1
Putative sugar acetyltransferase.
       0.605
EFL23776.1
Putative secreted protein.
    
   0.571
EFL26937.1
PPOX class probable F420-dependent enzyme.
 
     0.554
EFL26687.1
Conserved hypothetical protein.
    
   0.546
rbpA-2
Electron transporter; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.506
EFL26979.1
Conserved hypothetical protein.
 
     0.462
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.