STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21160.1cro/CI family transcriptional regulator. (196 aa)    
Predicted Functional Partners:
EFL27778.1
Putative glucosyltransferase.
  
 
 0.943
EFL21161.1
Putative integral membrane protein; Unextendable partial coding region.
 
     0.849
EFL21159.1
YbaK/prolyl-tRNA synthetase associated region.
       0.840
EFL27833.1
DNA-binding protein.
 
 0.839
EFL21385.1
Mannose-1-phosphate guanyltransferase.
  
 
 0.798
EFL25118.1
Glycosyl transferase.
  
 0.700
EFL25894.1
Glycosyl transferase.
  
 0.700
EFL27376.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
  0.650
EFL21218.1
Putative methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
  0.645
EFL28740.1
Type I polyketide synthase AVES 2; Unextendable partial coding region.
  
 
 0.634
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.