Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL21164.1Conserved hypothetical protein. (150 aa)    
Predicted Functional Partners:
EFL22260.1
Isochorismatase.
  
 
 0.849
EFL21165.1
Putative membrane protein.
       0.789
EFL21163.1
DedA family protein.
       0.740
EFL29011.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
  
 
 0.687
EFL25464.1
Thioesterase.
     
  0.653
EFL25471.1
Thioesterase.
     
  0.653
EFL23782.1
Putative iron-sulfur oxidoreductase.
  
 
 0.613
EFL24641.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.613
EFL26615.1
Oxidoreductase FAD-binding domain/oxidoreductase NAD-binding domain/2Fe-2S iron-sulfur cluster binding domain protein.
  
 
 0.613
EFL28077.1
Putative iron-sulfur oxidoreductase.
  
 
 0.613
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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