STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21165.1Putative membrane protein. (356 aa)    
Predicted Functional Partners:
EFL21164.1
Conserved hypothetical protein.
       0.810
EFL22809.1
Sensor histidine kinase/response regulator.
   
 0.804
EFL26320.1
Conserved hypothetical protein.
  
     0.759
EFL22543.1
Putative radical SAM domain protein; Overlaps another CDS with the same product name.
  
     0.756
EFL22553.1
Basic proline-rich protein.
  
     0.745
EFL21163.1
DedA family protein.
       0.722
EFL24454.1
Conserved hypothetical protein.
  
     0.717
EFL22400.1
Collagen alpha-1(III) chain.
  
  
  0.709
EFL27138.1
Sensor histidine kinase/response regulator.
   
 0.707
EFL27506.1
Conserved hypothetical protein.
  
   0.703
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.