STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21178.1alpha-L-rhamnosidase. (886 aa)    
Predicted Functional Partners:
EFL21686.1
Basic proline-rich protein.
 
     0.858
EFL21177.1
Putative major facilitator superfamily (MFS) transporter.
 
     0.718
EFL21689.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.715
EFL28359.1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
 0.700
EFL28211.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
 0.675
EFL28569.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
 0.675
EFL27730.1
Sulfatase-modifying factor 1 (C-alpha-formyglycine-generating enzyme 1).
 
   0.641
EFL28823.1
Sulfatase-modifying factor 1 (C-alpha-formyglycine-generating enzyme 1).
 
   0.639
EFL21176.1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
 0.625
EFL29253.1
Beta-glucuronidase (GUS) (Beta-D-glucuronosideglucuronosohydrolase); Belongs to the glycosyl hydrolase 2 family.
 
 0.604
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.