STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21199.1Putative secreted oxidoreductase. (470 aa)    
Predicted Functional Partners:
EFL21198.1
Puromycin resistance protein Pur8; Belongs to the major facilitator superfamily.
       0.773
EFL29250.1
Monooxygenase.
  
  
  0.754
EFL21200.1
Putative mucin-1 (MUC-1).
    
  0.629
EFL21197.1
Transcriptional regulator.
 
     0.604
EFL28287.1
Salicylate 1-monooxygenase.
  
  
 
0.596
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.584
EFL27154.1
C-5 sterol desaturase (Sterol-C5-desaturase).
   
 0.580
EFL27601.1
Polyketide synthase; Truncated CDS.
   
 
 0.533
EFL22291.1
Putative oxidoreductase.
  
     0.521
EFL20373.1
Putative type I polyketide synthase WcbR.
  
 
 0.515
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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