STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21201.1Senescence marker protein-30 family protein. (298 aa)    
Predicted Functional Partners:
EFL27644.1
Gluconolactonase.
  
  
  0.855
EFL28404.1
Putative dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.757
EFL27094.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
    
 0.718
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
    
 0.653
EFL26435.1
Galactonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.550
EFL24877.1
Non-specific serine/threonine protein kinase.
 
  
 0.537
EFL28848.1
Starvation-sensing protein RspA.
 
  
 0.507
EFL28509.1
Starvation sensing protein; Unextendable partial coding region.
 
  
 0.504
EFL20620.1
Galactonate dehydratase.
 
  
 0.490
EFL21202.1
GntR family transcriptional regulator.
       0.470
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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