STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21204.1Putative solute-binding lipoprotein. (450 aa)    
Predicted Functional Partners:
EFL21206.1
Putative ABC-type sugar transport system, permease component.
 
 0.969
EFL21205.1
Putative ABC-type sugar transport system, permease component.
 
  0.965
EFL26659.1
ABC transporter, permease.
 
 0.870
EFL21008.1
Putative ABC-type sugar transport system, permease component.
 
 0.867
EFL28243.1
Putative ABC-type sugar transport system, permease component.
 
 0.866
EFL28354.1
Putative ABC-type sugar transport system, permease component.
 
 0.866
EFL26658.1
Putative ABC-type sugar transport system, permease component.
 
  0.855
EFL21203.1
Beta-galactosidase 1 (Beta-galactosidase I) (Lactase).
 
     0.847
EFL28353.1
Putative ABC-type sugar transport system, permease component.
 
  0.847
EFL28241.1
Sugar transport system permease.
 
  0.841
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.