Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL21212.1alfa-L-rhamnosidase. (1026 aa)    
Predicted Functional Partners:
EFL20454.1
Beta-glucosidase.
  
  
  0.752
EFL25886.1
Beta-galactosidase.
    
 0.731
EFL21174.1
Glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family.
    
 0.670
EFL28621.1
Putative glycosyl hydrolase.
 
     0.645
EFL28349.1
Basic proline-rich protein.
  
  
  0.635
EFL20953.1
crp/Fnr family transcriptional regulator.
    
 0.607
EFL22029.1
Chitinase.
     
 0.596
EFL22871.1
Beta-glucosidase.
     
  0.595
EFL26442.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
     
  0.595
EFL27655.1
Glycosyl hydrolase, family 3.
     
  0.595
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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