STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21212.1alfa-L-rhamnosidase. (1026 aa)    
Predicted Functional Partners:
EFL28621.1
Putative glycosyl hydrolase.
 
     0.644
EFL28349.1
Basic proline-rich protein.
  
  
  0.637
EFL26329.1
Putative glycosyl hydrolase family 32 protein; Belongs to the glycosyl hydrolase 32 family.
  
  
  0.633
EFL27834.1
Putative mucin-1 (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT)(Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin)(Tumor-associated epithelial membrane antigen) (EMA) (H23AG) (Peanut-reactive urinary mucin) (PUM).
  
  
  0.613
EFL26325.1
Beta-fructosidase (Sucrase) (Invertase); Belongs to the glycosyl hydrolase 32 family.
  
  
  0.608
EFL22029.1
Chitinase.
     
 0.594
EFL29292.1
alpha-L-fucosidase 2 (Alpha-L-fucosidefucohydrolase 2) (Alpha-1,2-fucosidase 2).
  
     0.587
EFL21689.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.581
EFL22457.1
Putative alpha-L-fucosidase.
 
     0.570
EFL21448.1
alpha-L-fucosidase 2 (Alpha-L-fucosidefucohydrolase 2) (Alpha-1,2-fucosidase 2).
 
 
  0.557
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.