STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21215.1Putative heavy metal-associated domain protein. (89 aa)    
Predicted Functional Partners:
EFL26547.1
Superoxide dismutase, copper/zinc binding.
   
 0.987
EFL20663.1
E1-E2 family cation-transporting ATPase.
  
 
 0.796
EFL20292.1
Copper-exporting ATPase.
  
 
 0.768
EFL20326.1
Copper-exporting ATPase.
  
 
 0.768
EFL21250.1
Copper-exporting ATPase.
  
 
 0.768
EFL23904.1
Cadmium-exporting ATPase.
  
 
 0.768
EFL25996.1
Copper-exporting ATPase.
  
 
 0.768
EFL29180.1
Copper-exporting ATPase.
  
 
 0.768
EFL21216.1
Conserved hypothetical protein.
  
  
 0.758
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.568
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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