Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL21217.1Putative regulatory protein. (352 aa)    
Predicted Functional Partners:
EFL28914.1
Probable sulfopyruvate decarboxylase alpha subunit.
   
    0.865
EFL29437.1
LigA protein.
   
    0.860
EFL28852.1
Formate dehydrogenase, iron-sulfur subunit; Unextendable partial coding region.
   
    0.753
EFL23144.1
PE-PGRS family protein.
   
    0.748
EFL24544.1
Putative bacterial stress protein.
   
    0.748
EFL28787.1
Putative membrane protein.
   
    0.748
EFL29464.1
Putative membrane protein.
   
    0.748
EFL25706.1
ArsR family transcriptional regulator.
  
   
 0.525
EFL27865.1
PrpF, AcnD-accessory.
   
    0.512
EFL26934.1
Translation initiation factor IF-2.
  
     0.483
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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