STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21219.1EmrB/QacA family drug resistance transporter. (480 aa)    
Predicted Functional Partners:
EFL21318.1
Membrane transporter.
  
     0.654
EFL27057.1
Putative major facilitator superfamily (MFS) transporter.
  
     0.643
EFL24889.1
Putative major facilitator superfamily (MFS) transporter.
  
     0.639
EFL21220.1
Hypothetical protein.
       0.568
EFL21221.1
LysR family transcriptional regulator; Truncated CDS.
       0.568
EFL21222.1
Major facilitator superfamily transporter MFS_1.
 
    
0.565
EFL29167.1
Putative integral membrane efflux protein; Unextendable partial coding region.
  
     0.469
EFL27376.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.451
EFL29310.1
Major facilitator family transporter.
  
     0.436
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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