STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21232.1TetR family transcriptional regulator. (180 aa)    
Predicted Functional Partners:
EFL20356.1
Putative TetR-family transcriptional regulator.
  
     0.774
EFL22277.1
TetR family transcriptional regulator.
  
     0.774
EFL27504.1
Vegetative cell wall protein gp1 (Hydroxyproline-rich glycoprotein 1).
  
     0.774
EFL24347.1
Putative TetR-family transcriptional regulator.
  
     0.772
EFL21976.1
Transcriptional regulator.
  
     0.766
EFL21233.1
Short-chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.720
EFL24796.1
TetR family transcriptional regulator.
  
   
 0.529
EFL20393.1
Putative transcriptional regulatory protein (TetR family).
  
     0.482
EFL24795.1
NAD dependent epimerase/dehydratase.
  
     0.405
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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