STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21244.1Conserved hypothetical protein. (81 aa)    
Predicted Functional Partners:
EFL25960.1
Putative alpha/beta hydrolase family protein.
  
    0.709
EFL22394.1
Translation initiation factor IF-2.
  
     0.678
EFL21630.1
Non-ribosomal peptide synthetase.
   
 0.667
EFL20547.1
Nitrilotriacetate monooxygenase component A; Overlaps another CDS with the same product name.
  
     0.626
EFL20546.1
Nitrilotriacetate monooxygenase component A; Overlaps another CDS with the same product name.
  
     0.607
EFL22130.1
Dibenzothiophene desulfurization enzyme C (DBT sulfur dioxygenase); Truncated CDS; unextendable partial coding region.
  
    0.580
EFL22125.1
Dibenzothiophene desulfurization enzyme C (DBT sulfur dioxygenase).
  
    0.576
EFL29276.1
Monooxygenase.
  
     0.564
EFL23511.1
Conserved hypothetical protein.
  
     0.557
EFL23120.1
Putative FG-GAP repeat protein.
  
     0.543
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.