Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL21246.1Conserved hypothetical protein. (395 aa)    
Predicted Functional Partners:
EFL21247.1
Conserved hypothetical protein.
 
     0.875
EFL24877.1
Non-specific serine/threonine protein kinase.
   
 0.732
EFL23596.1
Conserved hypothetical protein.
    
   0.568
EFL26206.1
Conserved hypothetical protein.
    
   0.512
EFL21102.1
Leupeptin-inactivating enzyme 1 (LIE1).
   
 0.501
EFL22029.1
Chitinase.
   
 
 0.482
EFL20953.1
crp/Fnr family transcriptional regulator.
     
 0.480
EFL25266.1
Cell surface glycoprotein 1 (Outer layer protein B) (S-layerprotein 1).
   
 0.449
EFL21248.1
Histidine acid phosphatase.
       0.443
EFL24780.1
Hypothetical protein.
  
 
 0.428
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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