STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21258.1Isopenicillin N epimerase. (384 aa)    
Predicted Functional Partners:
EFL27022.1
NifU family SUF system FeS assembly protein.
 
 0.961
EFL21259.1
Putative secreted solute-binding protein.
 
     0.942
EFL21260.1
Binding-protein-dependent transport system inner membrane component.
 
     0.914
EFL21261.1
Sugar ABC transporter, permease.
 
     0.908
EFL27020.1
FeS assembly ATPase SufC.
  
  
 0.818
EFL21262.1
PE-PGRS family protein.
 
     0.800
EFL27018.1
FeS assembly protein SufD.
  
 
 0.750
EFL21377.1
Glycine dehydrogenase; Truncated CDS; Belongs to the GcvP family.
    
  0.742
EFL27017.1
FeS assembly protein SufB.
  
 
 0.742
EFL22809.1
Sensor histidine kinase/response regulator.
  
 
 0.713
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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