Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL21258.1Isopenicillin N epimerase. (384 aa)    
Predicted Functional Partners:
EFL27022.1
NifU family SUF system FeS assembly protein.
 
 0.955
EFL21259.1
Putative secreted solute-binding protein.
 
     0.938
EFL21260.1
Binding-protein-dependent transport system inner membrane component.
 
     0.907
EFL21261.1
Sugar ABC transporter, permease.
 
     0.901
EFL28071.1
Putative acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase subfamily.
     
  0.855
EFL21262.1
PE-PGRS family protein.
 
     0.799
EFL27020.1
FeS assembly ATPase SufC.
  
  
 0.794
EFL27017.1
FeS assembly protein SufB.
  
 
 0.733
EFL27018.1
FeS assembly protein SufD.
  
 
 0.730
EFL23407.1
Thiazole biosynthesis adenylyltransferase ThiF.
  
 
 0.728
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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