STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21259.1Putative secreted solute-binding protein. (477 aa)    
Predicted Functional Partners:
EFL21260.1
Binding-protein-dependent transport system inner membrane component.
 
  0.998
EFL21261.1
Sugar ABC transporter, permease.
 
  0.973
EFL21258.1
Isopenicillin N epimerase.
 
     0.938
EFL21262.1
PE-PGRS family protein.
 
  
 0.849
EFL25135.1
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.826
EFL28085.1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
  
 0.826
EFL28659.1
Sugar ABC transporter, permease.
 
 0.808
EFL22622.1
Putative ABC-type sugar transport system, permease component.
 
 0.707
EFL26619.1
Binding-protein dependent transporter.
 
 0.704
EFL20457.1
Sugar ABC transporter, permease.
  
 0.660
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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