STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21283.1Putative secreted protein. (491 aa)    
Predicted Functional Partners:
EFL28501.1
Putative secreted protein.
 
     0.783
EFL25155.1
Putative secreted protein.
 
     0.778
EFL21013.1
Putative secreted protein.
 
     0.776
EFL28602.1
LigA protein; Unextendable partial coding region.
  
     0.686
EFL25040.1
Putative membrane protein.
 
     0.659
EFL25672.1
Putative membrane protein.
 
     0.641
EFL25380.1
Putative regulator of sigma factor.
  
     0.633
EFL27820.1
Putative regulator of sigma factor.
  
     0.591
EFL25757.1
Conserved hypothetical protein.
  
     0.590
EFL21017.1
Putative integral membrane protein.
 
     0.573
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.