STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21295.1Methylesterase. (319 aa)    
Predicted Functional Partners:
EFL21294.1
Putative beta-carotene desaturase/methylase.
 
   
 0.875
EFL21194.1
Biphenyl 2,3-dioxygenase, beta subunit.
  
 0.818
EFL28296.1
Ring hydroxylating beta subunit family protein.
  
 0.818
EFL29030.1
Benzoate 1,2-dioxygenase, small subunit.
  
 0.818
EFL21296.1
Phytoene dehydrogenase (Phytoene desaturase); Unextendable partial coding region.
 
   
 0.733
EFL29029.1
Benzoate dioxygenase, ferredoxin reductase component.
  
 
 0.702
EFL21293.1
Putative lycopene cyclase.
 
  
 0.688
EFL23782.1
Putative iron-sulfur oxidoreductase.
  
 
 0.598
EFL24641.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.598
EFL26615.1
Oxidoreductase FAD-binding domain/oxidoreductase NAD-binding domain/2Fe-2S iron-sulfur cluster binding domain protein.
  
 
 0.598
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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