STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21301.1Mandelate racemase/muconate lactonizing enzyme family protein. (359 aa)    
Predicted Functional Partners:
EFL28286.1
Muconolactone delta-isomerase.
 
 
 0.866
EFL21303.1
Methyltransferase domain protein.
 
     0.854
EFL21304.1
Putative transporter substrate-binding protein.
 
     0.850
EFL21299.1
Conserved hypothetical protein.
 
     0.837
EFL21302.1
Major facilitator superfamily transporter MFS_1.
 
     0.831
EFL21305.1
Peptide/nickel/opine uptake family ABC transporter, permease.
 
    0.823
EFL21300.1
Pyridoxal-5-phosphate-dependent enzyme, beta subunit.
 
     0.822
EFL21306.1
ABC transporter, permease.
 
    0.735
EFL21307.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein.
 
     0.715
EFL28285.1
Catechol 1,2-dioxygenase.
  
 
 0.708
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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