Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL21320.1Cholesterol oxidase (CHOD). (547 aa)    
Predicted Functional Partners:
EFL25265.1
GMC oxidoreductase.
  
  
 
0.882
EFL26548.1
P450 heme-thiolate protein; Belongs to the cytochrome P450 family.
     
 0.857
EFL28536.1
LigA protein.
     
  0.707
EFL21321.1
Gamma-aminobutyrate permease.
       0.664
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
     
  0.664
EFL26803.1
Glycosyl transferase.
  
    0.576
EFL22310.1
Putative secreted protein.
   
   0.562
EFL26791.1
Cytochrome c family protein.
   
   0.562
EFL23782.1
Putative iron-sulfur oxidoreductase.
     
 0.538
EFL24641.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
     
 0.538
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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