STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21323.1LigA protein. (1130 aa)    
Predicted Functional Partners:
EFL28540.1
Spore-associated protein A.
  
     0.577
EFL26104.1
PE-PGRS family protein.
  
    0.522
EFL22584.1
Conserved hypothetical protein.
  
     0.518
EFL24875.1
LigA protein.
  
     0.504
EFL26424.1
Putative transcriptional regulator, GntR family.
  
     0.497
EFL23931.1
Regulatory protein AfsR.
  
     0.478
EFL27064.1
Conserved hypothetical protein.
  
     0.468
EFL29327.1
Regulatory protein AfsR.
  
     0.458
EFL24780.1
Hypothetical protein.
  
 
 0.454
EFL21555.1
Putative integral membrane protein.
  
     0.448
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.