STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21327.1Dimethylsulfoxide reductase; Truncated CDS. (374 aa)    
Predicted Functional Partners:
EFL28852.1
Formate dehydrogenase, iron-sulfur subunit; Unextendable partial coding region.
 
 0.993
EFL25491.1
biotin-[acetyl-CoA-carboxylase] ligase.
     
 0.840
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
  
 
 0.818
EFL26930.1
Glutamate synthase large subunit.
  
 0.816
EFL22310.1
Putative secreted protein.
  
 0.792
EFL26791.1
Cytochrome c family protein.
  
 0.792
EFL27335.1
Putative Formate dehydrogenase.
  
 0.773
EFL23529.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.762
EFL21169.1
Translation elongation factor TU.
   
 
 0.723
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.723
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.