STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21334.1Mandelate racemase/muconate lactonizing enzyme domain protein. (276 aa)    
Predicted Functional Partners:
EFL27369.1
Hydrolase.
 
  
 0.924
EFL27364.1
Short chain dehydrogenase/reductase family oxidoreductase.
 
  
  0.881
EFL21333.1
L-asparagine operon repressor (GntR family); Truncated CDS.
       0.511
EFL21332.1
L-asparagine permease.
       0.508
EFL20777.1
Polyketide synthase.
  
 
  0.501
EFL28210.1
Erythronolide synthase, modules 5 and 6 (ORF 3) (6-deoxyerythronolide B synthase III) (DEBS 3).
  
 
  0.501
EFL27368.1
Putative D-threo-aldose 1-dehydrogenase.
 
    0.471
EFL25756.1
Fumarylacetoacetate hydrolase.
 
  
 0.437
EFL21331.1
L-asparaginase.
       0.435
EFL20947.1
4-hydroxy-2-oxovalerate aldolase (HOA); Belongs to the HpcH/HpaI aldolase family.
  
 
 0.423
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.