STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21350.1Conserved hypothetical protein. (128 aa)    
Predicted Functional Partners:
EFL21351.1
Conserved hypothetical protein.
 
     0.954
EFL25363.1
Conserved hypothetical protein.
 
     0.808
EFL21349.1
3-oxoacyl-(acyl-carrier-protein) reductase.
       0.783
EFL21348.1
Short-chain dehydrogenase/reductase family oxidoreductase.
       0.772
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.710
EFL21357.1
Rieske iron-sulfur protein.
       0.605
EFL21358.1
PPOX class probable F420-dependent enzyme subfamily.
       0.585
EFL23324.1
Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
     0.444
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.