Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL21359.1Isochorismatase; Unextendable partial coding region. (236 aa)    
Predicted Functional Partners:
EFL21358.1
PPOX class probable F420-dependent enzyme subfamily.
 
     0.850
EFL22260.1
Isochorismatase.
     
 0.711
EFL21407.1
Conserved hypothetical protein.
  
     0.680
EFL23928.1
Amidohydrolase 2.
  
     0.669
EFL24099.1
Amidohydrolase 2.
 
     0.656
EFL24767.1
Putative integral membrane protein.
  
     0.636
EFL24807.1
Putative two-component system sensor kinase/response regulator, bifunctional protein.
  
 
   0.625
gpsA
Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
   0.621
EFL25251.1
Conserved hypothetical protein.
  
     0.617
EFL28570.1
Isochorismatase.
  
  
  0.610
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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