STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21359.1Isochorismatase; Unextendable partial coding region. (236 aa)    
Predicted Functional Partners:
EFL21358.1
PPOX class probable F420-dependent enzyme subfamily.
 
     0.865
EFL22260.1
Isochorismatase.
     
 0.736
EFL28570.1
Isochorismatase.
  
  
  0.723
EFL21407.1
Conserved hypothetical protein.
  
     0.680
EFL23928.1
Amidohydrolase 2.
  
     0.669
EFL24099.1
Amidohydrolase 2.
 
     0.654
EFL25361.1
6-aminohexanoate-cyclic-dimer hydrolase; Belongs to the amidase family.
    
  0.641
EFL28132.1
6-aminohexanoate-cyclic-dimer hydrolase; Belongs to the amidase family.
    
  0.641
EFL28187.1
Peptide amidase.
    
  0.641
EFL28298.1
Probable indoleacetamide hydrolase.
    
  0.641
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.