STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21366.1Putative secreted protein. (267 aa)    
Predicted Functional Partners:
EFL25174.1
Trehalose-phosphate synthase.
  
 
 0.919
EFL26245.1
Conserved hypothetical protein.
  
 0.876
EFL21367.1
Conserved hypothetical protein.
 
     0.846
EFL28265.1
Putative LigA.
  
 
 0.810
EFL26727.1
Pullulanase (Alpha-dextrin endo-1,6-alpha-glucosidase) (Pullulan 6-glucanohydrolase).
  
 
 0.753
EFL21102.1
Leupeptin-inactivating enzyme 1 (LIE1).
    
  0.696
EFL22321.1
Catalase HPII.
   
  
 0.684
EFL24481.1
Conserved hypothetical protein; Truncated CDS.
  
     0.637
EFL21365.1
Conserved hypothetical protein.
  
   0.626
EFL25118.1
Glycosyl transferase.
  
 0.621
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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