STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21372.1Putative CAAX amino protease family protein. (270 aa)    
Predicted Functional Partners:
EFL25865.1
Fatty acid binding protein.
  
  
 0.701
EFL25172.1
Conserved hypothetical protein.
  
     0.632
EFL21373.1
Von Willebrand factor, type A.
       0.605
EFL21374.1
CBS domain pair protein; Truncated CDS.
       0.605
EFL26450.1
Conserved hypothetical protein.
  
     0.574
EFL27188.1
ABC transporter, ATP-binding protein.
  
 
 0.568
EFL28900.1
ABC transporter, ATP-binding protein.
  
 
 0.568
EFL23437.1
Sec-independent protein translocase TatB-like protein.
  
     0.519
EFL24245.1
Putative AP endonuclease, family 2 protein.
 
     0.488
EFL23376.1
Conserved hypothetical protein; Truncated CDS.
  
     0.408
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.