STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21396.1Amino acid ABC transporter, permease. (256 aa)    
Predicted Functional Partners:
EFL21395.1
Glutamine ABC transporter, ATP-binding protein.
 
 0.999
EFL21397.1
Putative amino acid ABC transporter, periplasmic amino acid-binding protein.
 
 0.997
EFL28979.1
Putative amino acid ABC transporter; Belongs to the bacterial solute-binding protein 3 family.
 0.960
EFL20467.1
Putative amino acid ABC transporter, ATP-binding protein.
 
 0.954
EFL20963.1
Putative amino acid ABC transporter, ATP-binding protein; Truncated CDS; unextendable partial coding region.
 
 0.954
EFL22407.1
Glutamate transport ATP-binding protein.
 
 0.954
EFL22783.1
Glutamate transport ATP-binding protein.
 
 0.954
EFL23313.1
Amino acid ABC transporter, ATP-binding protein.
 
 0.954
EFL27255.1
Amino acid ABC transporter, ATP-binding protein.
 
 0.954
EFL28977.1
Glutamine ABC transporter, ATP-binding protein.
 
 0.954
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.