STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21418.1FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family. (818 aa)    
Predicted Functional Partners:
EFL21377.1
Glycine dehydrogenase; Truncated CDS; Belongs to the GcvP family.
 
 0.997
EFL20437.1
Sarcosine oxidase, delta subunit.
 
 0.990
EFL20435.1
Sarcosine oxidase gamma subunit.
 
 0.988
EFL23862.1
FAD dependent oxidoreductase.
 
0.981
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
 0.980
EFL20406.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
  
 0.976
EFL21419.1
Rieske family iron-sulfur cluster-binding protein.
 
 
  0.973
EFL26613.1
Putative N-methylproline demethylase.
 
 0.946
EFL23861.1
Putative N,N-dimethylglycine oxidase.
 
0.944
EFL26930.1
Glutamate synthase large subunit.
  
 
 0.940
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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