STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21418.1FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family. (818 aa)    
Predicted Functional Partners:
EFL20437.1
Sarcosine oxidase, delta subunit.
 
 0.999
EFL20435.1
Sarcosine oxidase gamma subunit.
 
 0.998
EFL21377.1
Glycine dehydrogenase; Truncated CDS; Belongs to the GcvP family.
 
 0.997
EFL23862.1
FAD dependent oxidoreductase.
 
0.994
EFL20406.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
 
0.992
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
 0.992
EFL23861.1
Putative N,N-dimethylglycine oxidase.
 
0.983
EFL26930.1
Glutamate synthase large subunit.
  
 
 0.967
EFL23292.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
  
 
 0.951
EFL27376.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.945
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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