STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21422.1Vegetative cell wall protein gp1 (Hydroxyproline-rich glycoprotein 1). (295 aa)    
Predicted Functional Partners:
EFL28038.1
S-antigen protein.
  
     0.529
EFL26646.1
Heme oxygenase.
 
  
 0.506
EFL27797.1
Conserved hypothetical protein; Unextendable partial coding region.
  
     0.506
EFL20697.1
Cation efflux family protein.
   
    0.482
EFL22065.1
Cobalt-zinc-cadmium efflux permease.
   
    0.482
EFL22190.1
Galactocerebrosidase.
  
     0.474
EFL22082.1
Truncated CDS; proline-rich protein HaeIII subfamily 1 (Proline-richprotein MP-2); unextendable partial coding region.
  
     0.473
EFL25242.1
Iron-dependent repressor IdeR.
      
 0.456
EFL24877.1
Non-specific serine/threonine protein kinase.
 
     0.450
EFL21421.1
Putative amino acid permease.
       0.429
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.