STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21430.1Major facilitator family transporter. (439 aa)    
Predicted Functional Partners:
EFL21431.1
Conserved hypothetical protein; Belongs to the D-glutamate cyclase family.
       0.808
EFL21432.1
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.710
EFL21429.1
GntR family transcriptional regulator.
       0.576
EFL21373.1
Von Willebrand factor, type A.
 
    0.464
EFL22329.1
Major facilitator family transporter.
  
     0.462
EFL28323.1
Anion:cation symporter (ACS) family MFS transporter.
  
     0.438
EFL21165.1
Putative membrane protein.
  
    0.430
EFL27317.1
Putative transcriptional regulator, LysR family.
  
    0.422
EFL27590.1
Putative cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.418
EFL28278.1
MFS Superfamily, 4-hydroxyphenylacetate symporter; Truncated CDS; unextendable partial coding region.
  
     0.414
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.