STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21432.1LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (228 aa)    
Predicted Functional Partners:
EFL21433.1
Putative urea carboxylase/allophanate hydrolase domains protein.
 
 0.978
EFL28802.1
Putative allophanate hydrolase subunit 2 domain protein.
 
 
 0.970
EFL24868.1
Allophanate hydrolase, subunit 1.
 
 
 0.967
EFL27871.1
Putative allophanate hydrolase subunit 1 family protein.
 
 
 0.967
EFL21431.1
Conserved hypothetical protein; Belongs to the D-glutamate cyclase family.
 
    0.960
EFL24869.1
Putative allophanate hydrolase subunit 2 domain protein.
 
 0.940
EFL27872.1
Putative allophanate hydrolase subunit 2 domain protein.
 
 
 0.939
EFL22987.1
1-pyrroline-5-carboxylate dehydrogenase.
   
 
  0.910
EFL20874.1
Putative glutamine synthetase.
   
 
  0.889
EFL22018.1
Glutamine synthetase.
   
 
  0.889
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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