STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21469.1Putative oxidoreductase. (524 aa)    
Predicted Functional Partners:
EFL21470.1
Conserved hypothetical protein.
     
 0.852
EFL21468.1
2-nitropropane dioxygenase family oxidoreductase.
       0.811
EFL20343.1
Putative mucin-2 (MUC-2) (Intestinal mucin-2); truncated CDS; Belongs to the FPP/GGPP synthase family.
  
 
 0.801
EFL22054.1
Squalene synthase HpnD.
  
 
 0.784
EFL22055.1
Squalene synthase HpnC.
  
 
 0.784
EFL21467.1
AMP-binding protein.
       0.773
EFL20373.1
Putative type I polyketide synthase WcbR.
  
 
 0.709
EFL27123.1
Subunit D/I family magnesium chelatase.
  
 
 0.663
EFL27124.1
Putative magnesium chelatase; Unextendable partial coding region.
  
 
 0.663
EFL23032.1
Putative glycine-sarcosine methyltransferase.
   
 
 0.571
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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