STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21486.1Hopene-associated glycosyltransferase HpnB. (396 aa)    
Predicted Functional Partners:
EFL23001.1
Pas:ggdef.
  
 
 0.817
EFL22054.1
Squalene synthase HpnD.
  
 0.807
EFL25118.1
Glycosyl transferase.
  
 
 0.790
EFL25894.1
Glycosyl transferase.
  
 
 0.790
EFL23898.1
Putative tetratricopeptide repeat protein.
 
 
 0.771
EFL22049.1
Hopanoid biosynthesis associated radical SAM protein HpnH.
 
   
 0.756
EFL22051.1
Squalene-hopene cyclase.
 
     0.730
EFL22053.1
Putative squalene/phytoene dehydrogenase.
 
   
 0.609
EFL21646.1
Putative dolichyl-phosphate beta-glucosyltransferase.
  
 
 0.607
EFL20953.1
crp/Fnr family transcriptional regulator.
  
 
  0.594
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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