STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21488.1Conserved hypothetical protein. (168 aa)    
Predicted Functional Partners:
EFL21487.1
Putative stress protein.
       0.785
EFL23167.1
Large Ala/Glu-rich protein.
  
     0.772
EFL27131.1
Conserved hypothetical protein.
  
     0.769
EFL23359.1
Putative tetratricopeptide repeat protein.
  
     0.767
EFL24027.1
Putative membrane protein.
  
  
 0.767
EFL26159.1
Putative membrane protein.
  
     0.766
EFL24645.1
Conserved hypothetical protein.
  
     0.765
EFL21443.1
Conserved hypothetical protein; Unextendable partial coding region.
  
   
 0.764
EFL24248.1
Alanine-rich protein.
  
     0.764
EFL25254.1
Conserved hypothetical protein.
  
     0.764
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.