STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21499.1DeoR family transcriptional regulator. (244 aa)    
Predicted Functional Partners:
EFL21500.1
Polyketide cyclase/dehydrase superfamily protein.
       0.851
EFL23765.1
PTS system, fructose-specific family, IIABC component.
 
  
 0.774
EFL28625.1
Putative DeoR-family transcriptional regulator; Truncated CDS.
  
     0.774
EFL25612.1
PTS system, fructose-specific IIABC component.
 
  
 0.765
EFL25167.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.692
EFL23766.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.687
EFL21498.1
Putative membrane protein.
       0.605
EFL28502.1
Conserved hypothetical protein.
       0.605
EFL22728.1
GNAT family acetyltransferase.
    
   0.567
EFL22729.1
GNAT family acetyltransferase.
    
   0.567
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.