STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21500.1Polyketide cyclase/dehydrase superfamily protein. (156 aa)    
Predicted Functional Partners:
EFL21499.1
DeoR family transcriptional regulator.
       0.851
EFL28672.1
Aldehyde oxidase and xanthine dehydrogenase domains protein.
  
 
 0.689
EFL29184.1
Conserved hypothetical protein.
  
   
 0.673
EFL21498.1
Putative membrane protein.
 
     0.661
EFL21450.1
Putative regulatory protein; Truncated CDS; unextendable partial coding region.
  
     0.638
EFL22647.1
PE-PGRS family protein.
  
     0.633
EFL25259.1
Putative regulatory protein.
  
     0.633
EFL27494.1
YhgE/Pip domain-containing protein.
  
     0.625
EFL22543.1
Putative radical SAM domain protein; Overlaps another CDS with the same product name.
  
     0.592
EFL21663.1
LigA protein; Overlaps another CDS with the same product name.
  
     0.556
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.