STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21503.1Collagen alpha-1(I) chain (Alpha-1 type I collagen). (205 aa)    
Predicted Functional Partners:
EFL23824.1
Putative regulatory protein.
  
  0.795
EFL23498.1
Putative regulatory protein.
  
  0.769
EFL24016.1
Putative regulatory protein.
  
  0.758
EFL20853.1
Putative regulatory protein.
  
  0.750
EFL21938.1
Putative regulatory protein.
  
  0.741
EFL27053.1
Putative regulatory protein.
  
     0.732
EFL22652.1
Conserved hypothetical protein.
  
  0.725
EFL23506.1
Putative regulatory protein; Unextendable partial coding region.
  
  0.707
EFL23965.1
Putative regulatory protein.
  
    0.699
EFL24357.1
Conserved hypothetical protein.
 
  0.693
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.