STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21524.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
   
 0.804
EFL27138.1
Sensor histidine kinase/response regulator.
   
 0.707
EFL21383.1
Forkhead-associated.
    
 
 0.690
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.592
EFL24618.1
Non-specific serine/threonine protein kinase.
  
 
 0.511
EFL26833.1
Serine/threonine-protein kinase PK-1 (stoPK-1).
  
 
 0.511
EFL24650.1
Putative FHA domain protein.
   
 
 0.504
EFL27188.1
ABC transporter, ATP-binding protein.
  
 
 0.493
EFL28900.1
ABC transporter, ATP-binding protein.
  
 
 0.493
EFL24649.1
FHA domain protein; Truncated CDS; unextendable partial coding region.
   
 
 0.470
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.