STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21527.1Putative LacI-family transcriptional regulator. (355 aa)    
Predicted Functional Partners:
EFL21526.1
Putative glucokinase.
       0.785
EFL26722.1
HTH-type transcriptional regulator MalR (Maltose operontranscriptional repressor); Truncated CDS; unextendable partial coding region.
  
     0.771
EFL28411.1
LacI family transcription regulator.
  
     0.764
EFL21011.1
Putative DeoR-family transcriptional regulator.
  
     0.700
EFL26930.1
Glutamate synthase large subunit.
    
 
 0.697
EFL22730.1
HPr family phosphocarrier.
   
 
 0.585
EFL23169.1
Conserved hypothetical protein.
       0.572
EFL21630.1
Non-ribosomal peptide synthetase.
    
 
 0.538
EFL21631.1
Non-ribosomal peptide synthetase, component; Overlaps another CDS with the same product name.
    
   0.531
EFL28780.1
Non-ribosomal peptide synthetase.
    
   0.531
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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