Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL21528.1Putative integral membrane protein. (134 aa)    
Predicted Functional Partners:
EFL24574.1
Putative integral membrane protein; Unextendable partial coding region.
 
     0.882
EFL21530.1
LigA protein.
 
     0.790
EFL21529.1
Conserved hypothetical protein.
       0.770
EFL20647.1
Integral membrane protein.
 
     0.685
EFL24646.1
Conserved hypothetical protein.
 
     0.473
EFL22905.1
Putative transcriptional regulator.
  
     0.460
EFL28676.1
Putative integral membrane protein.
  
     0.420
hmtP
Conserved hypothetical protein.
  
     0.413
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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