STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21540.1Conserved hypothetical protein. (466 aa)    
Predicted Functional Partners:
EFL21537.1
Threonine aldolase, low-specificity.
 
   
 0.938
EFL21539.1
Putative oxidoreductase.
     
 0.886
EFL21541.1
Putative glycerophosphodiester phosphodiesterase.
       0.767
EFL25360.1
Putative cytoplasmic protein.
       0.605
EFL23305.1
Conserved hypothetical protein.
  
     0.538
EFL26169.1
Conserved hypothetical protein.
  
     0.507
EFL21542.1
GNAT family acetyltransferase.
       0.449
EFL23315.1
Conserved hypothetical protein.
  
     0.446
EFL21125.1
Conserved hypothetical protein.
  
     0.417
EFL22873.1
Helix-turn-helix, Fis-type.
  
     0.410
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.