STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21546.1Xre family toxin-antitoxin system, antitoxin component. (195 aa)    
Predicted Functional Partners:
EFL21544.1
Branched-chain amino acid transporter (AzlD).
 
   
 0.954
EFL21545.1
Putative azaleucine resistance protein AzlC.
 
   
 0.947
EFL20490.1
GNAT family acetyltransferase.
    
  0.579
EFL23529.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
 
  
  0.556
EFL24834.1
Transcriptional regulator, XRE family with cupin sensor.
  
 
  0.554
EFL22321.1
Catalase HPII.
    
  0.541
EFL21160.1
cro/CI family transcriptional regulator.
 
0.532
EFL21547.1
Putative integral membrane protein.
       0.490
EFL22360.1
NAD-dependent deacetylase 2.
  
 
  0.485
EFL27741.1
Conserved hypothetical protein; Unextendable partial coding region.
  
 
  0.485
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.