STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21556.1Putative acetyltransferase; Truncated CDS. (102 aa)    
Predicted Functional Partners:
EFL23140.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.698
EFL21557.1
Methyltransferase, family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
 
     0.655
EFL26930.1
Glutamate synthase large subunit.
   
 
 0.640
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.623
EFL23615.1
Putative membrane protein.
  
     0.504
EFL22768.1
Rhizobactin siderophore biosynthesis protein RhbC.
 
 
 0.494
EFL22905.1
Putative transcriptional regulator.
  
     0.480
EFL22191.1
Putative ricin-type beta-trefoil lectin domain protein.
  
    0.477
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.477
EFL28783.1
Putative oxygenase.
  
     0.473
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.