STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21584.1Glycolate oxidase, subunit GlcD; Truncated CDS. (350 aa)    
Predicted Functional Partners:
EFL22372.1
Putative transposase for insertion sequence element.
  
 0.839
EFL22321.1
Catalase HPII.
  
 0.782
EFL21582.1
ABC-type nitrate/sulfonate/bicarbonate transport system periplasmic component.
       0.781
EFL21583.1
acyl-CoA dehydrogenase.
       0.781
EFL22456.1
Malate synthase A; Belongs to the malate synthase family.
  
 
 0.777
EFL25713.1
Oxidoreductase, FAD-binding.
  
  
 
0.777
EFL23373.1
Catalase; Belongs to the catalase family.
   
 0.776
EFL21691.1
Product YvfV.
 
 
 0.745
EFL25202.1
Putative hydrolase.
    
 0.745
EFL26605.1
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; Unextendable partial coding region.
   
 
 0.744
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.