STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21585.1Oxidoreductase, FAD-binding; Unextendable partial coding region. (87 aa)    
Predicted Functional Partners:
EFL21586.1
FMN reductase.
       0.588
EFL21584.1
Glycolate oxidase, subunit GlcD; Truncated CDS.
       0.524
EFL21582.1
ABC-type nitrate/sulfonate/bicarbonate transport system periplasmic component.
       0.514
EFL21583.1
acyl-CoA dehydrogenase.
       0.514
EFL21581.1
SsuD family monooxygenase.
       0.464
EFL21578.1
Sulfonate ABC transporter, permease SsuC.
       0.461
ssuB
Sulfonate ABC transporter, ATP-binding subunit SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
       0.461
EFL21580.1
Aliphatic sulfonates family ABC transporter, periplasmic substrate-binding protein.
       0.461
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.